Boehm D, Lam V, Schnolzer M, Ott M.
2023 Mar 9;42(3):112234. doi: 10.1016/j.celrep.2023.112234. Epub ahead of print. PMID: 36897778.
Archives: Publications
Publications
Rapid assembly of SARS-CoV-2 genomes reveals attenuation of the Omicron BA.1 variant through NSP6
Taha TY, Chen IP, Hayashi JM, Tabata T, Walcott K, Kimmerly GR, Syed AM, Ciling A, Suryawanshi RK, Martin HS, Bach BH, Tsou CL, Montano M, Khalid MM, Sreekumar BK, Kumar GR, Wyman S, Doudna JA, Ott M.
[Preprint]. 2023 Feb 9:2023.01.31.525914. doi: 10.1101/2023.01.31.525914. PMID: 36798416; PMCID: PMC9934579.
SARS-CoV-2 infection of airway organoids reveals conserved use of Tetraspanin-8 by Ancestral, Delta, and Omicron variants
Hysenaj L, Little S, Kulhanek K, Magnen M, Bahl K, Gbenedio OM, Prinz M, Rodriguez L, Andersen C, Rao AA, Shen A, Lone JC, Lupin-Jimenez LC, Bonser LR, Serwas NK, Mick E, Khalid MM, Taha TY, Kumar R, Li JZ, Ding VW, Matsumoto S, Maishan M, Sreekumar B, Simoneau C, Nazarenko I, Tomlinson MG, Khan K, von Gottberg A, Sigal A, Looney MR, Fragiadakis GK, Jablons DM, Langelier CR, Matthay M, Krummel M, Erle DJ, Combes AJ, Sil A, Ott M, Kratz JR, Roose JP.
S2213-6711(23)00014-0. doi: 10.1016/j.stemcr.2023.01.011. Epub ahead of print. PMID: 36827975; PMCID: PMC9948283.
Nuclear accumulation of host transcripts during Zika Virus Infection
Leon K, Flynn R, Khalid MM, Fontaine KA, Nguyen T, Kumar GR, Simoneau CR, Tomar S, Jimenez-Morales D, Dunlap M, Kaye J, Shah PS, Finkbeiner S, Krogan NJ, Bertozzi C, Carette JE, Ott M.
19(1):e1011070. doi: 10.1371/journal.ppat.1011070. Online ahead of print.
Mild SARS-CoV-2 infection results in long-lasting microbiota instability.
Upadhyay V, Suryawanshi R, Tasoff P, McCavitt-Malvido M, Kumar GR, Murray VW, Noecker C, Bisanz JE, Hswen Y, Ha C, Sreekumar B, Chen IP, Lynch SV, Ott M, Lee S, Turnbaugh PJ.
bioRxiv [Preprint]. 2022 Dec 8:2022.12.07.519508. doi: 10.1101/2022.12.07.519508. PMID: 36523400; PMCID: PMC9753784.
Neutralizing Immunity Induced Against the Omicron BA.1 and BA.2 Variants in Vaccine Breakthrough Infections.
Brazer N, Morris MK, Servellita V, Anglin K, Saldhi P, Garcia-Knight M, Bethancourt S, Sotomayor-Gonzalez A, Wang B, Foresythe A, Nguyen J, Gliwa AS, Pineda-Ramirez J, Sanchez RD, Zhang Y, Ott M, Wadford DA, Andino R, Kelly JD, Hanson C, Chiu CY.
J Infect Dis. 2022 Nov 11;226(10):1688-1698. doi: 10.1093/infdis/jiac384. PMID: 36134603; PMCID: PMC9619439.
Neuropilin-1 Mediates SARS-CoV-2 Infection of Astrocytes in Brain Organoids, Inducing Inflammation Leading to Dysfunction and Death of Neurons.
Kong W, Montano M, Corley MJ, Helmy E, Kobayashi H, Kinisu M, Suryawanshi R, Luo X, Royer LA, Roan NR, Ott M, Ndhlovu LC, Greene WC.
mBio. 2022 Oct 31;13(6):e0230822. doi: 10.1128/mbio.02308-22. Epub ahead of print. PMID: 36314791; PMCID: PMC9765283.
Viral Hijacking of BET Proteins.
Chen IP, Ott M.
Viruses. 2022 Oct 17;14(10):2274. doi: 10.3390/v14102274. PMID: 36298829; PMCID: PMC9609653.
Accelerating PERx reaction enables covalent nanobodies for potent neutralization of SARS-CoV-2 and variants.
Yu B, Li S, Tabata T, Wang N, Cao L, Kumar GR, Sun W, Liu J, Ott M, Wang L.
Chem. 2022 Oct 13;8(10):2766-2783. doi: 10.1016/j.chempr.2022.07.012. Epub 2022 Jul 18. PMID: 35874165; PMCID: PMC9288967.
Catching BETs by viruses.
Mohamad Zandian, Irene P. Chen, Siddappa N. Byrareddy, Danica Galonić Fujimori, Melanie Ott, Tatiana G. Kutateladze, Catching BETs by viruses. Biochimica et Biophysica Acta (BBA) – Gene Regulatory Mechanisms, 2022, https://doi.org/10.1016/j.bbagrm.2022.19485