Rathore U, Haas P, Easwar Kumar V, Hiatt J, Haas KM, Bouhaddou M, Swaney DL, Stevenson E, Zuliani-Alvarez L, McGregor MJ, Turner-Groth A, Ochieng’ Olwal C, Bediako Y, Braberg H, Soucheray M, Ott M, Eckhardt M, Hultquist JF, Marson A, Kaake RM, Krogan NJ.
2024 Feb 27:e0222223. doi: 10.1128/mbio.02222-23. Epub ahead of print. PMID: 38411080.
Archives: Publications
Publications
De novo-designed minibinders expand the synthetic biology sensing repertoire
Weinberg ZY, Soliman SS, Kim MS, Chen IP, Ott M, El-Samad H.
2024 Jan 15:2024.01.12.575267. doi: 10.1101/2024.01.12.575267. PMID: 38293112; PMCID: PMC10827046.
Previous exposure to Spike-providing parental strains confers neutralizing immunity to XBB lineage and other SARS-CoV-2 recombinants in the context of vaccination
Suryawanshi RK, Taha TY, McCavitt-Malvido M, Silva I, Khalid MM, Syed AM, Chen IP, Saldhi P, Sreekumar B, Montano M, Foresythe K, Tabata T, Kumar GR, Sotomayor-Gonzalez A, Servellita V, Gliwa A, Nguyen J, Kojima N, Arellanor T, Bussanich A, Hess V, Shacreaw M, Lopez L, Brobeck M, Turner F, Wang Y, Ghazarian S, Davis G, Rodriguez D, Doudna J, Spraggon L, Chiu CY, Ott M.
2023 Dec;12(2):2270071. doi: 10.1080/22221751.2023.2270071. Epub 2023 Oct 31. PMID: 37869789; PMCID: PMC10619466.
Assembly reactions of SARS-CoV-2 nucleocapsid protein with nucleic acid
Zhao H, Syed AM, Khalid MM, Nguyen A, Ciling A, Wu D, Yau WM, Srinivasan S, Esposito D, Doudna JA, Piszczek G, Ott M, Schuck P.
[Preprint]. 2023 Nov 23:2023.11.22.568361. doi: 10.1101/2023.11.22.568361. PMID: 38045338; PMCID: PMC10690241.
Protocol for an in vitro assay to study HIV-1 Tat methylation
Boehm D, Kaehlcke K, Schnoelzer M, Ott M.
2023 Nov 17;4(4):102687. doi: 10.1016/j.xpro.2023.102687. Epub ahead of print. PMID: 37979180.
Hepatitis C virus infects and perturbs liver stem cells
Meyers NL, Ashuach T, Lyons DE, Khalid MM, Simoneau CR, Erickson AL, Bouhaddou M, Nguyen TT, Kumar GR, Taha TY, Natarajan V, Baron JL, Neff N, Zanini F, Mahmoudi T, Quake SR, Krogan NJ, Cooper S, McDevitt TC, Yosef N, Ott M.
2023 Nov 8:e0131823. doi: 10.1128/mbio.01318-23. Epub ahead of print. PMID: 37938000.
A flow cytometry-based assay to investigate HIV-1 expression in SMYD5 shRNA containing primary CD4+ T cells
Boehm D, Ott M.
STAR Protoc. 2023 Nov 4;4(4):102694. doi: 10.1016/j.xpro.2023.102694. Epub ahead of print. PMID: 37925635.
Colloidal aggregation confounds cell-based Covid-19 antiviral screens
Glenn IS, Hall LN, Khalid MM, Ott M, Shoichet BK.
2023 Oct 30:2023.10.27.564435. doi: 10.1101/2023.10.27.564435. PMID: 37961552; PMCID: PMC10634915.
HIV-1 Remission: Accelerating the Path to Permanent HIV-1 Silencing
Lyons DE, Kumar P, Roan NR, Defechereux PA, Feschotte C, Lange UC, Murthy N, Sameshima P, Verdin E, Ake JA, Parsons MS, Nath A, Gianella S, Smith DM, Kallas EG, Villa TJ, Strange R, Mwesigwa B, Furler O’Brien RL, Nixon DF, Ndhlovu LC, Valente ST, Ott M.
2023 Oct 28;15(11):2171. doi: 10.3390/v15112171. PMID: 38005849; PMCID: PMC10674359.
Post-acute immunological and behavioral sequelae in mice after Omicron infection
Ma T, Suryawanshi RK, Miller SR, Ly KK, Thomas R, Elphick N, Yin K, Luo X, Kaliss N, Chen IP, Montano M, Sreekumar B, Standker L, Münch J, Damron FH, Palop JJ, Ott M, Roan NR.
Preprint]. 2023 Oct 4:2023.06.05.543758. doi: 10.1101/2023.06.05.543758. PMID: 37333294; PMCID: PMC10274741.